Classification and Biodiversity
Organisms are classified into three domains (Bacteria, Archaea, Eukarya) and a hierarchy: domain, kingdom, phylum, class, order, family, genus, species; named binomially (Homo sapiens). Eukarya kingdoms: protoctists, fungi, plants, animals. Biodiversity includes ecosystem, species (richness and evenness) and genetic diversity. Measure with random sampling (quadrats at random coordinates) or systematic sampling (transects across a gradient). Mobile animals: mark–release–recapture, . Simpson's index (0 to 1; higher = more diverse). Spearman's rank tests correlation between two variables: .
Learning objectives
- Describe the three-domain system and taxonomic hierarchy.
- Describe sampling methods.
- Calculate Simpson's index and population estimates.
- Use Spearman's rank correlation.
Two fields both have 4 species. Why might one still be more diverse?
Core idea
How do you count every snail in a field? You don't: you sample, mark and estimate.
Classification organises life into domains and ranks; sampling and indices let us measure biodiversity fairly.
Based on rRNA and cell structure.
Counts 10, 20, 30, 40.
- Goal
- D.
- Strategy
- 1 − Σ(n/N)².
- N = 100.
- Subtract.
Summary
- Domain to species.
- Sampling methods.
- Simpson's D, Lincoln index, Spearman's.
- Species richness
- Number of species in an area.
- Species evenness
- How evenly individuals are spread among species.
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